STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_31590Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1009 aa)    
Predicted Functional Partners:
BU52_31585
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.805
BU52_31580
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.787
BU52_31575
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.784
BU52_25275
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
BU52_02530
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
BU52_31215
Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.499
BU52_31875
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
BU52_31570
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.471
BU52_03480
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
BU52_11120
SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.