STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIP52972.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
KIP52971.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.836
KIP52973.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.
  
   0.665
KIP53516.1
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
KIP52660.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
KIP51395.1
Copper transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.646
KIP52288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.625
KIP53517.1
Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
KIP53520.1
Cytochrome c oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
KIP53500.1
Sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
KIP51854.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
Your Current Organism:
Leucobacter komagatae
NCBI taxonomy Id: 55969
Other names: CCUG 49676, CIP 105084, DSM 8803, IFO 15245, JCM 9414, L. komagatae, NBRC 15245, VKM Ac-2073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.