Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KIP52520.1Hemin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (355 aa)    
Predicted Functional Partners:
hmuV
Hemin ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 0.989
KIP52120.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.961
KIP52521.1
Hemin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
fecE
Iron-dicitrate transporter ATP-binding subunit; Part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.932
KIP51739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.923
KIP52121.1
Fe3+-hydroxamate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.839
KIP51708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.708
KIP53287.1
Fe3+-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.640
KIP51611.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.640
KIP52524.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.539
Your Current Organism:
Leucobacter komagatae
NCBI taxonomy Id: 55969
Other names: CCUG 49676, CIP 105084, DSM 8803, IFO 15245, JCM 9414, L. komagatae, NBRC 15245, VKM Ac-2073
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