STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIP51394.1Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)    
Predicted Functional Partners:
KIP52211.1
Agmatine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the agmatine deiminase family.
    
 0.764
KIP52657.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.761
argH
Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.708
KIP51596.1
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
 
  
 0.707
KIP51395.1
Copper transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
KIP53161.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.666
KIP53030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.577
KIP51939.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.577
KIP51409.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.577
KIP51393.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
Your Current Organism:
Leucobacter komagatae
NCBI taxonomy Id: 55969
Other names: CCUG 49676, CIP 105084, DSM 8803, IFO 15245, JCM 9414, L. komagatae, NBRC 15245, VKM Ac-2073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.