STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177D324Uncharacterized protein. (2475 aa)    
Predicted Functional Partners:
A0A177DY31
GRASP55_65 domain-containing protein.
    
 0.990
AA0117_g2070
Syntaxin-5.
   
 0.987
AA0117_g149
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.973
A0A177DKP0
Uncharacterized protein.
    
 0.851
AA0117_g199
Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 17 family.
 
      0.711
A0A177DE29
Ras-domain-containing protein.
    
 0.697
A0A177DJF1
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.681
AA0117_g10603
Snare-like protein; Belongs to the synaptobrevin family.
     
 0.653
A0A177DI88
Snare docking complex subunit; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.643
AA0117_g1636
Uncharacterized protein.
     
 0.637
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.