STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177D382EF-hand superfamily Ca2+-modulated protein. (205 aa)    
Predicted Functional Partners:
A0A177DV27
Metallo-hydrolase/oxidoreductase.
 
  
   0.900
A0A177DL15
Uncharacterized protein.
    
 
 0.877
A0A177DX12
Sfi1-domain-containing protein.
    
 
 0.866
A0A177DQ13
DNA repair protein Rhp41.
    
 0.839
A0A177DZS1
Rad4-domain-containing protein.
    
 0.839
A0A177DIH3
UV excision repair protein Rad23.
   
 0.826
A0A177DM50
Uncharacterized protein.
    
 0.797
A0A177D7P8
WD40 repeat-like protein.
    
 0.716
A0A177DHT0
Uncharacterized protein.
   
 
 0.691
A0A177DHY4
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.691
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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