STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177D797Uncharacterized protein. (351 aa)    
Predicted Functional Partners:
AA0117_g2640
Nuclear cap-binding protein subunit 2.
   
 
 0.489
AA0117_g5264
mRNA cap guanine-N7 methyltransferase.
   
 
 0.484
A0A177DJ54
Cap binding protein.
   
 
 0.466
A0A177D2Q6
Uncharacterized protein.
   
 
 0.457
A0A177D3J5
Uncharacterized protein.
   
 
 0.457
A0A177D4R5
Uncharacterized protein.
   
 
 0.457
A0A177DZB3
Uncharacterized protein.
   
 
 0.457
A0A177E0Z9
Uncharacterized protein.
   
 
 0.457
A0A177DCU1
Uncharacterized protein.
    
 
 0.408
AA0117_g667
Uncharacterized protein.
    
 
 0.408
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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