STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177D832HET domain-containing protein. (717 aa)    
Predicted Functional Partners:
AA0117_g7188
40S ribosomal protein-like protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.746
A0A177DEN4
Elongation factor 3.
  
 
 0.744
AA0117_g3231
Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.742
AA0117_g7267
60S ribosomal protein.
   
 
 0.742
AA0117_g150
Uncharacterized protein.
   
 
 0.742
AA0117_g4011
Ribosomal_L23eN domain-containing protein.
   
 
 0.737
AA0117_g8971
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
     
 0.732
A0A177D6S3
Uncharacterized protein.
  
 
 0.726
A0A177DBX0
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.725
AA0117_g4442
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.723
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.