STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DC16Uncharacterized protein. (498 aa)    
Predicted Functional Partners:
A0A177DCT7
Ribosomal protein S18.
   
   0.483
A0A177DR80
Mitochondrial ribosomal protein subunit L23.
   
   0.470
AA0117_g5344
Ribosomal protein S7.
   
   0.468
AA0117_g822
Mitochondrial 54S ribosomal protein YmL23.
   
   0.468
AA0117_g11003
30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
    
   0.457
A0A177D2Y5
Manganese and iron superoxide dismutase.
    
   0.457
A0A177D393
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.457
AA0117_g9517
ATPase synthesis protein 25.
    
   0.457
AA0117_g3525
L51_S25_CI-B8 domain-containing protein.
    
   0.457
A0A177D563
Nucleic acid-binding protein.
    
   0.457
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.