STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DF33Delta 8-(E)-sphingolipid desaturase. (569 aa)    
Predicted Functional Partners:
AA0117_g728
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
  
 
 0.666
A0A177DYC3
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
  
 
 0.666
AA0117_g4346
Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.
      
 0.659
AA0117_g3278
Lactamase_B domain-containing protein.
  
 
 0.604
A0A177DUD3
Ferredoxin.
  
 
 0.604
A0A177DKA8
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 
 0.548
AA0117_g7738
Putative sterol desaturase; Belongs to the sterol desaturase family.
  
 
 0.548
AA0117_g697
Sphingosine hydroxylase; Belongs to the sterol desaturase family.
  
 
 0.541
A0A177D9R8
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
  
 
 0.520
A0A177DK11
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 
 0.520
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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