STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DFD1WD_REPEATS_REGION domain-containing protein. (1320 aa)    
Predicted Functional Partners:
A0A177E194
WD_REPEATS_REGION domain-containing protein.
   
0.998
A0A177DUY2
WD40 repeat-like protein.
    
 0.997
A0A177D0V1
Uncharacterized protein.
    
 0.995
AA0117_g10669
Sec13 protein-like protein; Belongs to the WD repeat SEC13 family.
    
 0.995
A0A177DL08
DEP domain-containing protein.
   
 0.995
A0A177DPX2
NPR2-domain-containing protein.
    
 0.995
A0A177DYA9
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
    
 0.993
AA0117_g702
Gtr1/RagA G domain-containing protein.
   
 0.980
AA0117_g2535
Uncharacterized protein.
    
 0.975
A0A177E347
Uncharacterized protein.
    
 0.904
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.