STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DGK4Zn(2)-C6 fungal-type domain-containing protein. (724 aa)    
Predicted Functional Partners:
AA0117_g12484
Farnesyl-diphosphate farnesyltransferase.
  
 
 0.686
AA0117_g734
Erg28 protein.
   
 
 0.670
A0A177DBB4
APH domain-containing protein.
   
 0.666
A0A177DRF7
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.666
A0A177DG09
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
 
      0.665
AA0117_g9159
3-keto-steroid reductase.
   
 
 0.664
AA0117_g10892
ERG2 and sigma1 receptor-like protein.
   
 
 0.662
A0A177D9R8
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
   
 
 0.647
A0A177DK11
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.647
AA0117_g6466
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.647
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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