STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DHY9Concanavalin A-like lectin/glucanase. (462 aa)    
Predicted Functional Partners:
A0A177DML1
Supernatant protein factor, C-terminal domain-containing protein.
   
 0.701
AA0117_g2025
ER-derived vesicles protein-like protein ERV14.
     
 0.682
A0A177DHQ2
GOLD domain-containing protein.
   
 0.659
AA0117_g2070
Syntaxin-5.
     
 0.642
AA0117_g10603
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.639
AA0117_g8346
Protein transport protein.
    
 0.620
AA0117_g5451
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.619
A0A177DJF1
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 
 0.617
AA0117_g10669
Sec13 protein-like protein; Belongs to the WD repeat SEC13 family.
   
 0.614
AA0117_g1636
Uncharacterized protein.
   
 0.614
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.