STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DI09Uncharacterized protein. (880 aa)    
Predicted Functional Partners:
AA0117_g11845
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.866
AA0117_g2413
40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.844
AA0117_g9015
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
  
 
 0.741
AA0117_g481
40s ribosomal protein-like protein s20.
    
   0.735
AA0117_g5184
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
 
      0.707
A0A177DWZ2
BZIP transcription factor.
   
 
 0.691
A0A177DMM5
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.660
A0A177D8M0
RNA binding effector protein-like protein Scp160.
   
  
 0.649
A0A177D467
Aminopeptidase.
     
 0.613
AA0117_g7188
40S ribosomal protein-like protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.597
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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