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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AA0117_g6589Protein transport protein; Belongs to the STXBP/unc-18/SEC1 family. (715 aa)    
Predicted Functional Partners:
AA0117_g3412
t-SNARE coiled-coil homology domain-containing protein.
   
 0.975
AA0117_g10343
Synaptobrevin.
    
 0.974
AA0117_g8973
t-SNARE.
   
 0.949
A0A177E4A7
t-SNARE.
   
 0.949
AA0117_g9635
Exocyst complex component Sec6.
    
 0.832
A0A177DKH8
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 0.794
AA0117_g8477
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
    
 0.740
AA0117_g3233
Exocyst complex component Sec10.
    
 0.733
A0A177DJ37
Sec8_exocyst domain-containing protein.
    
 0.701
A0A177D9R1
AAA-domain-containing protein.
   
 
 0.685
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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