STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DM79Uncharacterized protein. (1643 aa)    
Predicted Functional Partners:
A0A177DP42
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
   0.850
A0A177DD92
Cullin-domain-containing protein; Belongs to the cullin family.
   
 0.843
A0A177DIU0
Cullin-2; Belongs to the cullin family.
   
 0.771
AA0117_g8714
Ankyrin repeat and BTB/POZ domain-containing protein 1.
    
 0.692
AA0117_g7243
DnaJ-domain-containing protein.
      
 0.682
A0A177E0T8
Uncharacterized protein.
    
   0.653
A0A177E108
DnaJ-domain-containing protein.
    
 
 0.532
AA0117_g6030
Uncharacterized protein.
    
 
 0.510
AA0117_g9397
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.495
AA0117_g9419
Uncharacterized protein.
    
   0.493
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.