STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DM99Uncharacterized protein. (144 aa)    
Predicted Functional Partners:
A0A177E059
Tat binding protein 1-interacting.
   
 0.900
AA0117_g709
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.758
A0A177D810
Uncharacterized protein.
   
 0.698
AA0117_g10887
Putative kinetochore protein nuf2.
   
    0.610
AA0117_g6605
Putative kinetochore protein spc25.
   
    0.554
A0A177DRE2
ARM repeat-containing protein.
   
    0.551
AA0117_g2478
DNA topoisomerase IV, alpha subunit.
    
 
 0.537
A0A177E1E5
HORMA-domain-containing protein.
   
  
 0.527
A0A177DEF6
DNA repair protein-like protein RAD57.
   
 0.525
A0A177DQ14
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
  
 0.513
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
Server load: low (24%) [HD]