STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DMA9Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (421 aa)    
Predicted Functional Partners:
A0A177DXC3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.849
A0A177D9B9
CDC45-like protein.
   
 0.728
A0A177DAI1
DNA helicase; Belongs to the MCM family.
   
 0.708
AA0117_g709
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.700
AA0117_g2541
BRCT domain-containing protein.
    
 
 0.664
A0A177DQG2
3'-5' exonuclease domain-containing protein.
   
 0.640
AA0117_g2555
HRDC domain-containing protein.
   
 0.640
AA0117_g11039
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.634
A0A177DAT9
Zf-primase domain-containing protein.
   
 
 0.634
A0A177DXR4
Exodeoxyribonuclease 1.
   
 0.614
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.