STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DR80Mitochondrial ribosomal protein subunit L23. (221 aa)    
Predicted Functional Partners:
A0A177E035
MRP-L47-domain-containing protein.
   
 
 0.974
AA0117_g10303
Ribonuclease III.
   
 
 0.956
AA0117_g2470
Uncharacterized protein.
   
 
 0.956
AA0117_g9761
Ribosomal protein L15.
   
 
 0.955
AA0117_g822
Mitochondrial 54S ribosomal protein YmL23.
   
 
 0.945
A0A177DCT7
Ribosomal protein S18.
   
 
 0.940
A0A177DEA5
Mitochondrial 54S ribosomal protein YmL9.
   
 
 0.940
A0A177DXA9
Uncharacterized protein.
   
   0.940
AA0117_g5608
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.937
A0A177E0C2
Urease accessory protein ureG.
   
 
 0.936
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.