STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AA0117_g6999J domain-containing protein. (369 aa)    
Predicted Functional Partners:
AA0117_g6657
Heat shock protein 70; Belongs to the heat shock protein 70 family.
  
 0.835
AA0117_g551
Heat shock protein 70; Belongs to the heat shock protein 70 family.
  
 0.590
AA0117_g822
Mitochondrial 54S ribosomal protein YmL23.
   
 
 0.575
AA0117_g4364
Heat shock protein 70-like protein-like protein.
  
 0.567
A0A177DLY0
Uncharacterized protein.
  
 0.545
A0A177DXX6
Flavin_Reduct domain-containing protein.
  
 0.545
A0A177E4H6
Heat shock protein 90.
  
 0.545
A0A177DHZ7
Heat shock protein 70.
  
 0.510
AA0117_g8705
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.498
A0A177DEU0
tRNA modification GTPase mss1 mitochondrial.
   
 
 0.494
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.