STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DUK5Sorting nexin mvp1. (715 aa)    
Predicted Functional Partners:
A0A177DPC5
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
   0.950
AA0117_g9761
Ribosomal protein L15.
 
 
  
 0.891
A0A177DWR6
AAA domain-containing protein.
 
      0.843
A0A177DVA7
PalH-domain-containing protein.
 
      0.663
A0A177DXC4
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.651
AA0117_g1811
Phox-like protein.
    
 
 0.601
AA0117_g12070
Vacuolar protein sorting-associated protein 26B-A.
    
 
 0.595
AA0117_g10423
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.562
AA0117_g2226
Sorting nexin-41.
   
  
 0.534
A0A177DQN9
PX domain-containing protein.
   
 
0.522
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.