STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AA0117_g12298Cyanide hydratase/nitrilase-like protein. (342 aa)    
Predicted Functional Partners:
A0A177DHF3
Nitrite reductase.
   
 
 0.923
AA0117_g5589
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.922
AA0117_g5163
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.922
A0A177D9Z1
Formamidase FmdS.
    
 0.914
AA0117_g11910
Glutamine synthetase.
    
 0.906
A0A177E054
Glutamine synthetase/guanido kinase; Belongs to the glutamine synthetase family.
    
 0.906
AA0117_g5432
Asparagine synthetase [glutamine-hydrolyzing] 2.
    
 0.831
A0A177DS75
Glutamine-hydrolyzing asparagine synthase.
    
 0.831
A0A177D9A4
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
 0.830
A0A177DY91
PLP-dependent transferase.
    
 0.830
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.