STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DVT3L-ornithine 5-monooxygenase (L-ornithine N(5)-oxygenase). (529 aa)    
Predicted Functional Partners:
AA0117_g9241
AlcB domain-containing protein.
 
   
 0.789
A0A177DG40
Uncharacterized protein.
      
 0.604
A0A177DXT5
Nonribosomal peptide synthetase 2.
  
   
 0.599
A0A177DBB3
Nonribosomal peptide synthase.
      
 0.549
A0A177DMW4
Aerobactin siderophore biosynthesis protein iucB.
 
   
 0.520
A0A177D367
Carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 
 0.509
A0A177D854
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
      
 0.490
AA0117_g4476
Plasma membrane iron permease.
      
 0.481
AA0117_g645
Dual specificity protein kinase.
 
 
    0.448
A0A177DNL0
Nonribosomal peptide synthetase 6.
      
 0.410
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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