STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177DZI9Serine palmitoyltransferase 1. (508 aa)    
Predicted Functional Partners:
AA0117_g3497
Serine palmitoyltransferas-like protein 2.
  
0.999
A0A177D1B2
NAD(P)-binding protein.
     
 0.985
AA0117_g5227
Orm1 type endoplasmic reticulum protein.
    
 
 0.948
A0A177DYR1
ARM repeat-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.944
AA0117_g7063
Target of rapamycin complex subunit.
     
  0.900
CC77DRAFT_4838
WD repeat-containing protein mip1.
     
  0.900
AA0117_g916
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.891
A0A177DWE5
Uncharacterized protein.
     
 0.857
A0A177DVA2
PLP-dependent transferase.
    
 0.835
A0A177DBI7
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.832
Your Current Organism:
Alternaria alternata
NCBI taxonomy Id: 5599
Other names: A. alternata, ATCC 66981 [[Alternaria tenuis]], Alternaria sp. AltIEIHBT, Alternaria sp. Ao34, Alternaria sp. Ao41, Alternaria sp. JZ017, Alternaria sp. M2-2, Alternaria sp. XJU-1, Alternaria tenuis, CBS 916.96 [[Alternaria tenuis]], EGS 34-016 [[Alternaria tenuis]], IMI 254138 [[Alternaria tenuis]], Torula alternata
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