STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_09902Dihydroxy-acid dehydratase. (633 aa)    
Predicted Functional Partners:
PV04_06415
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.898
PV04_06475
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.898
PV04_00829
Branched-chain amino acid aminotransferase.
  
 0.898
PV04_10491
Homocitrate synthase, mitochondrial; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.844
PV04_06766
Uncharacterized protein.
  
 0.837
PV04_01807
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.818
PV04_00175
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.818
PV04_07439
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
  
 
 0.808
PV04_02641
Histidinol dehydrogenase.
  
  
 0.806
PV04_08258
3-isopropylmalate dehydratase, large subunit.
  
 
 0.759
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.