STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_04238Uncharacterized protein. (490 aa)    
Predicted Functional Partners:
PV04_07429
Hsp90-like protein.
   
 0.999
PV04_07346
Flavin_Reduct domain-containing protein.
   
 0.999
PV04_06917
Uncharacterized protein.
   
 0.999
PV04_09365
CS domain-containing protein.
    
 0.993
PV04_01694
Uncharacterized protein.
   
 
 0.973
PV04_03118
E3 ubiquitin ligase complex SCF subunit sconC, variant; Belongs to the SKP1 family.
   
 
 0.971
PV04_06236
Guanylate cyclase domain-containing protein.
    
 
 0.959
PV04_01523
Uncharacterized protein.
    
 
 0.959
PV04_02612
Uncharacterized protein.
   
 
 0.917
PV04_10949
F-box domain-containing protein.
   
 
 0.917
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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