STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_04773Uncharacterized protein. (597 aa)    
Predicted Functional Partners:
PV04_10124
HECT domain-containing protein.
     
 0.977
PV04_02909
Cleavage and polyadenylation specificity factor subunit 2.
   
 
  0.763
PV04_06890
BZIP domain-containing protein.
    
  0.662
PV04_04914
Ubiquitin-40S ribosomal protein S27a.
    
  0.662
PV04_01166
Uncharacterized protein.
     
 0.652
PV04_07605
Polyubiquitin.
   
  0.650
PV04_07966
Uncharacterized protein.
   
  0.650
PV04_07925
E2_bind domain-containing protein.
    
  0.638
PV04_09928
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
  0.638
PV04_03262
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.630
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.