STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_08962Aldo_ket_red domain-containing protein. (383 aa)    
Predicted Functional Partners:
PV04_01095
Uncharacterized protein.
    
  0.517
PV04_01466
Uncharacterized protein.
    
  0.517
PV04_06146
Uncharacterized protein.
   
 0.513
PV04_06745
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.511
PV04_03426
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.507
PV04_05783
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.495
PV04_00883
Peptidase S59 domain-containing protein.
    
 0.435
PV04_10868
Uncharacterized protein.
    
 0.435
PV04_08678
Uncharacterized protein.
    
 0.435
PV04_06498
Aminotran_5 domain-containing protein.
   
 
  0.417
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.