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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_09055Uncharacterized protein. (1292 aa)    
Predicted Functional Partners:
PV04_08678
Uncharacterized protein.
  
 
  0.602
PV04_10132
ANK_REP_REGION domain-containing protein.
   
  0.561
PV04_10933
Uncharacterized protein.
  
 
  0.550
PV04_07841
Uncharacterized protein.
  
 
  0.543
PV04_06106
Uncharacterized protein.
  
 
   0.537
PV04_00284
Uncharacterized protein.
  
 
  0.528
PV04_08252
Uncharacterized protein.
  
 
  0.514
PV04_01582
Uncharacterized protein.
  
 
  0.500
PV04_08018
Uncharacterized protein.
  
 
   0.496
PV04_03794
Uncharacterized protein.
  
 
  0.492
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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