STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_09111Uncharacterized protein. (1333 aa)    
Predicted Functional Partners:
PV04_00365
Uncharacterized protein.
    
 0.892
PV04_08486
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.843
PV04_03356
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.833
PV04_03110
Uncharacterized protein.
  
 
0.820
PV04_02582
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.793
PV04_01699
Uncharacterized protein.
   
   0.793
PV04_05849
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
  0.788
PV04_00630
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
  0.741
PV04_07546
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
  0.720
PV04_00949
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.704
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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