Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV04_00019 | PV04_00627 | A0A0D2FTM1 | A0A0D2EDQ5 | Uncharacterized protein. | Uncharacterized protein. | 0.569 |
PV04_00019 | PV04_02047 | A0A0D2FTM1 | A0A0D2FZP5 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.537 |
PV04_00019 | PV04_03320 | A0A0D2FTM1 | A0A0D2FXC3 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.778 |
PV04_00019 | PV04_04603 | A0A0D2FTM1 | A0A0D2CU02 | Uncharacterized protein. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.915 |
PV04_00019 | PV04_06539 | A0A0D2FTM1 | A0A0D2G5I3 | Uncharacterized protein. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.662 |
PV04_00627 | PV04_00019 | A0A0D2EDQ5 | A0A0D2FTM1 | Uncharacterized protein. | Uncharacterized protein. | 0.569 |
PV04_00627 | PV04_02047 | A0A0D2EDQ5 | A0A0D2FZP5 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.811 |
PV04_00627 | PV04_03320 | A0A0D2EDQ5 | A0A0D2FXC3 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.755 |
PV04_00627 | PV04_03689 | A0A0D2EDQ5 | A0A0D2GH29 | Uncharacterized protein. | Serine-tRNA ligase. | 0.634 |
PV04_00627 | PV04_04603 | A0A0D2EDQ5 | A0A0D2CU02 | Uncharacterized protein. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.589 |
PV04_00627 | PV04_06539 | A0A0D2EDQ5 | A0A0D2G5I3 | Uncharacterized protein. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.749 |
PV04_00627 | PV04_08229 | A0A0D2EDQ5 | A0A0D2FH25 | Uncharacterized protein. | Serine-tRNA ligase. | 0.634 |
PV04_00627 | PV04_08271 | A0A0D2EDQ5 | A0A0D2G1W7 | Uncharacterized protein. | Uncharacterized protein. | 0.634 |
PV04_00627 | PV04_08429 | A0A0D2EDQ5 | A0A0D2G295 | Uncharacterized protein. | Signal peptidase complex catalytic subunit SEC11. | 0.747 |
PV04_00627 | PV04_09353 | A0A0D2EDQ5 | A0A0D2FWT7 | Uncharacterized protein. | Uncharacterized protein. | 0.599 |
PV04_02047 | PV04_00019 | A0A0D2FZP5 | A0A0D2FTM1 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.537 |
PV04_02047 | PV04_00627 | A0A0D2FZP5 | A0A0D2EDQ5 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.811 |
PV04_02047 | PV04_03320 | A0A0D2FZP5 | A0A0D2FXC3 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | WD_REPEATS_REGION domain-containing protein. | 0.981 |
PV04_02047 | PV04_04603 | A0A0D2FZP5 | A0A0D2CU02 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.447 |
PV04_02047 | PV04_06539 | A0A0D2FZP5 | A0A0D2G5I3 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.994 |
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