STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_01845F-box domain-containing protein. (689 aa)    
Predicted Functional Partners:
PV04_03118
E3 ubiquitin ligase complex SCF subunit sconC, variant; Belongs to the SKP1 family.
    
  0.643
PV04_00905
Xanthine dehydrogenase.
     
 0.616
PV04_00344
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.584
PV04_01285
Uncharacterized protein.
     
 0.581
PV04_00664
Farnesyl-diphosphate farnesyltransferase.
     
 0.549
PV04_00202
Uncharacterized protein.
   
 
 0.535
PV04_01692
O-acyltransferase.
   
 
  0.497
PV04_02097
O-acyltransferase.
   
 
  0.497
PV04_07943
Uncharacterized protein.
     
 0.477
PV04_00668
Uncharacterized protein.
  
     0.465
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.