STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PV04_07349Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (354 aa)    
Predicted Functional Partners:
PV04_04586
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
  0.884
PV04_09885
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
  0.867
PV04_06953
Uncharacterized protein.
    
 0.826
PV04_01615
Uncharacterized protein.
   
 0.611
PV04_10263
Uncharacterized protein.
   
 
 0.600
PV04_03766
Uncharacterized protein.
   
 0.593
PV04_07359
SH3 domain-containing protein.
   
 
 0.592
PV04_03973
Peroxisomal membrane protein PEX16.
   
 
 0.577
PV04_09096
Pex2_Pex12 domain-containing protein.
     
 0.520
PV04_08625
Uncharacterized protein.
   
 0.516
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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