Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PV04_07353Uncharacterized protein. (1028 aa)    
Predicted Functional Partners:
PV04_04663
WD_REPEATS_REGION domain-containing protein.
   
 0.943
PV04_08568
Histone deacetylase RPD3.
   
 0.939
PV04_02619
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.939
PV04_04794
Uncharacterized protein.
    
 0.932
PV04_07938
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
 
   
  0.926
PV04_08088
Histone H3; Belongs to the histone H3 family.
    
 0.910
PV04_04548
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.894
PV04_04771
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 
 0.878
PV04_10260
Uncharacterized protein.
   
 
 0.839
PV04_04569
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 
 0.786
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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