STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_07002Uncharacterized protein. (843 aa)    
Predicted Functional Partners:
PV04_01363
Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic.
   
 
 0.831
PV04_07962
Uncharacterized protein.
    
 
 0.826
PV04_02456
J domain-containing protein.
    
 
 0.826
PV04_01735
Uncharacterized protein.
    
 
 0.825
PV04_03068
Protein transporter SEC61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
    
 
 0.814
PV04_08448
Uncharacterized protein.
   
 0.762
PV04_02796
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.726
PV04_05079
Uncharacterized protein.
   
  0.476
PV04_04821
Non-specific serine/threonine protein kinase.
   
  0.476
PV04_00414
Protein kinase domain-containing protein.
   
  0.476
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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