Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV04_00414 | PV04_04821 | A0A0D2ED34 | A0A0D2E3J1 | Protein kinase domain-containing protein. | Non-specific serine/threonine protein kinase. | 0.427 |
PV04_00414 | PV04_07002 | A0A0D2ED34 | A0A0D2FI82 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.476 |
PV04_00414 | PV04_08448 | A0A0D2ED34 | A0A0D2FDW3 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.719 |
PV04_01363 | PV04_01735 | A0A0D2GLF9 | A0A0D2D7T8 | Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. | Uncharacterized protein. | 0.979 |
PV04_01363 | PV04_02456 | A0A0D2GLF9 | A0A0D2FPD6 | Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. | J domain-containing protein. | 0.961 |
PV04_01363 | PV04_02796 | A0A0D2GLF9 | A0A0D2FVN1 | Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.997 |
PV04_01363 | PV04_03068 | A0A0D2GLF9 | A0A0D2FWG7 | Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. | Protein transporter SEC61 subunit alpha; Belongs to the SecY/SEC61-alpha family. | 0.997 |
PV04_01363 | PV04_07002 | A0A0D2GLF9 | A0A0D2FI82 | Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. | Uncharacterized protein. | 0.831 |
PV04_01363 | PV04_07962 | A0A0D2GLF9 | A0A0D2CKA2 | Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. | Uncharacterized protein. | 0.978 |
PV04_01735 | PV04_01363 | A0A0D2D7T8 | A0A0D2GLF9 | Uncharacterized protein. | Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. | 0.979 |
PV04_01735 | PV04_02456 | A0A0D2D7T8 | A0A0D2FPD6 | Uncharacterized protein. | J domain-containing protein. | 0.991 |
PV04_01735 | PV04_02796 | A0A0D2D7T8 | A0A0D2FVN1 | Uncharacterized protein. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.949 |
PV04_01735 | PV04_03068 | A0A0D2D7T8 | A0A0D2FWG7 | Uncharacterized protein. | Protein transporter SEC61 subunit alpha; Belongs to the SecY/SEC61-alpha family. | 0.979 |
PV04_01735 | PV04_07002 | A0A0D2D7T8 | A0A0D2FI82 | Uncharacterized protein. | Uncharacterized protein. | 0.825 |
PV04_01735 | PV04_07962 | A0A0D2D7T8 | A0A0D2CKA2 | Uncharacterized protein. | Uncharacterized protein. | 0.979 |
PV04_02456 | PV04_01363 | A0A0D2FPD6 | A0A0D2GLF9 | J domain-containing protein. | Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. | 0.961 |
PV04_02456 | PV04_01735 | A0A0D2FPD6 | A0A0D2D7T8 | J domain-containing protein. | Uncharacterized protein. | 0.991 |
PV04_02456 | PV04_02796 | A0A0D2FPD6 | A0A0D2FVN1 | J domain-containing protein. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.948 |
PV04_02456 | PV04_03068 | A0A0D2FPD6 | A0A0D2FWG7 | J domain-containing protein. | Protein transporter SEC61 subunit alpha; Belongs to the SecY/SEC61-alpha family. | 0.974 |
PV04_02456 | PV04_07002 | A0A0D2FPD6 | A0A0D2FI82 | J domain-containing protein. | Uncharacterized protein. | 0.826 |
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