STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_01347Uncharacterized protein. (606 aa)    
Predicted Functional Partners:
PV04_02473
Uncharacterized protein.
   
 0.941
PV04_04410
PIG-P domain-containing protein.
    
 0.913
PV04_08136
Uncharacterized protein.
   
 0.905
PV04_05483
Uncharacterized protein.
    
 0.898
PV04_04185
Uncharacterized protein.
   
 0.890
PV04_09235
Uncharacterized protein.
     
 0.880
PV04_05215
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.855
PV04_04028
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.776
PV04_07528
Uncharacterized protein.
   
 
  0.761
PV04_10290
Alkyl transferase; Belongs to the UPP synthase family.
   
 
  0.753
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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