Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV04_00942 | PV04_01510 | A0A0D2EEN5 | A0A0D2FY00 | Uncharacterized protein. | PHD finger-like domain-containing protein 5B. | 0.983 |
PV04_00942 | PV04_01625 | A0A0D2EEN5 | A0A0D2EGR6 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.981 |
PV04_00942 | PV04_02650 | A0A0D2EEN5 | A0A0D2CYT8 | Uncharacterized protein. | Pre-mRNA-splicing factor rse1. | 0.993 |
PV04_00942 | PV04_03327 | A0A0D2EEN5 | A0A0D2FS21 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
PV04_00942 | PV04_04769 | A0A0D2EEN5 | A0A0D2GA48 | Uncharacterized protein. | SF3b1 domain-containing protein. | 0.992 |
PV04_00942 | PV04_04844 | A0A0D2EEN5 | A0A0D2E3M3 | Uncharacterized protein. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.985 |
PV04_00942 | PV04_06425 | A0A0D2EEN5 | A0A0D2FGG9 | Uncharacterized protein. | Matrin-type domain-containing protein. | 0.997 |
PV04_00942 | PV04_08473 | A0A0D2EEN5 | A0A0D2G2D7 | Uncharacterized protein. | PSP domain-containing protein. | 0.993 |
PV04_00942 | PV04_08846 | A0A0D2EEN5 | A0A0D2CFH2 | Uncharacterized protein. | Uncharacterized protein. | 0.995 |
PV04_00942 | PV04_10373 | A0A0D2EEN5 | A0A0D2F2K5 | Uncharacterized protein. | Matrin-type domain-containing protein. | 0.998 |
PV04_01510 | PV04_00942 | A0A0D2FY00 | A0A0D2EEN5 | PHD finger-like domain-containing protein 5B. | Uncharacterized protein. | 0.983 |
PV04_01510 | PV04_01625 | A0A0D2FY00 | A0A0D2EGR6 | PHD finger-like domain-containing protein 5B. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.982 |
PV04_01510 | PV04_02650 | A0A0D2FY00 | A0A0D2CYT8 | PHD finger-like domain-containing protein 5B. | Pre-mRNA-splicing factor rse1. | 0.997 |
PV04_01510 | PV04_03327 | A0A0D2FY00 | A0A0D2FS21 | PHD finger-like domain-containing protein 5B. | Uncharacterized protein. | 0.997 |
PV04_01510 | PV04_04769 | A0A0D2FY00 | A0A0D2GA48 | PHD finger-like domain-containing protein 5B. | SF3b1 domain-containing protein. | 0.997 |
PV04_01510 | PV04_04844 | A0A0D2FY00 | A0A0D2E3M3 | PHD finger-like domain-containing protein 5B. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.998 |
PV04_01510 | PV04_06425 | A0A0D2FY00 | A0A0D2FGG9 | PHD finger-like domain-containing protein 5B. | Matrin-type domain-containing protein. | 0.994 |
PV04_01510 | PV04_08473 | A0A0D2FY00 | A0A0D2G2D7 | PHD finger-like domain-containing protein 5B. | PSP domain-containing protein. | 0.997 |
PV04_01510 | PV04_08846 | A0A0D2FY00 | A0A0D2CFH2 | PHD finger-like domain-containing protein 5B. | Uncharacterized protein. | 0.992 |
PV04_01510 | PV04_10373 | A0A0D2FY00 | A0A0D2F2K5 | PHD finger-like domain-containing protein 5B. | Matrin-type domain-containing protein. | 0.988 |
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