STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_01479Uncharacterized protein. (585 aa)    
Predicted Functional Partners:
PV04_06166
40S ribosomal protein S17.
   
 0.995
PV04_01853
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.995
PV04_00630
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.994
PV04_07974
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.994
PV04_02053
40S ribosomal protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.994
PV04_06011
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.993
PV04_03137
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.993
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.993
PV04_06934
40S ribosomal protein S27.
   
 0.993
PV04_02810
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.993
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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