STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_05095Zn(2)-C6 fungal-type domain-containing protein. (765 aa)    
Predicted Functional Partners:
PV04_07023
WD_REPEATS_REGION domain-containing protein.
   
  0.560
PV04_03478
Ipi1_N domain-containing protein.
    
 0.546
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.495
PV04_06011
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.478
PV04_02767
CP-type G domain-containing protein.
   
  0.437
PV04_07372
Uncharacterized protein.
    
  0.436
PV04_05008
CLP1_P domain-containing protein.
    
  0.435
PV04_06706
Ribosomal_L2_C domain-containing protein.
    
  0.432
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.419
PV04_03675
Uncharacterized protein.
    
  0.418
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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