STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV04_01406Uncharacterized protein. (524 aa)    
Predicted Functional Partners:
PV04_10019
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.756
PV04_04483
Uncharacterized protein.
    
  0.756
PV04_07546
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
 
 
  0.624
PV04_06568
Uncharacterized protein.
    
  0.545
PV04_05378
Ribosomal protein S2.
   
  0.543
PV04_03728
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.542
PV04_09707
Ribosomal protein S6.
    
  0.542
PV04_08074
Ribosomal protein S15.
   
  0.542
PV04_02939
Ribosomal protein S16.
   
  0.542
PV04_04847
MRP-S28 domain-containing protein.
    
  0.539
Your Current Organism:
Phialophora americana
NCBI taxonomy Id: 5601
Other names: Cadophora americana, Capronia semi-immersa, Capronia semiimmersa, Dictyotrichiella semi-immersa, P. americana
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