Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB08814.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
ORB08554.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
ORB04775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
ORB00901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
ORB08813.1
Peptidase M15; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.725
ORB02497.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
ORB03495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
ORB04731.1
TIGR02569 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
ORB00418.1
Peptidase M50; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
ORB04742.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
ORB04262.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
Your Current Organism:
Mycobacterium mantenii
NCBI taxonomy Id: 560555
Other names: CIP 109863, DSM 45255, JCM 18113, M. mantenii, Mycobacterium mantenii van Ingen et al. 2009, Mycobacterium sp. E152, Mycobacterium sp. E2660, Mycobacterium sp. E3078, Mycobacterium sp. E3121, Mycobacterium sp. NLA000401474, Mycobacterium sp. NLA000800224, strain NLA000401474
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