Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORB06935.1Type VII secretion protein EsxD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (104 aa)    
Predicted Functional Partners:
ORB06934.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
 0.867
ORB06937.1
PE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.635
ORB06936.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.588
ORB06933.1
ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.444
Your Current Organism:
Mycobacterium mantenii
NCBI taxonomy Id: 560555
Other names: CIP 109863, DSM 45255, JCM 18113, M. mantenii, Mycobacterium mantenii van Ingen et al. 2009, Mycobacterium sp. E152, Mycobacterium sp. E2660, Mycobacterium sp. E3078, Mycobacterium sp. E3121, Mycobacterium sp. NLA000401474, Mycobacterium sp. NLA000800224, strain NLA000401474
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