STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB06798.1Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)    
Predicted Functional Partners:
ORB06730.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.617
ORB01931.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
ORB06729.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.555
BST30_09960
Zinc-binding dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
ORB04312.1
Cell division protein DivIVA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.492
BST30_08325
LysR family transcriptional regulator; Frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.468
ORB00009.1
Na+/H+ antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.468
ORA97719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.453
ORA97018.1
Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.453
ORA97019.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.453
Your Current Organism:
Mycobacterium mantenii
NCBI taxonomy Id: 560555
Other names: CIP 109863, DSM 45255, JCM 18113, M. mantenii, Mycobacterium mantenii van Ingen et al. 2009, Mycobacterium sp. E152, Mycobacterium sp. E2660, Mycobacterium sp. E3078, Mycobacterium sp. E3121, Mycobacterium sp. NLA000401474, Mycobacterium sp. NLA000800224, strain NLA000401474
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.