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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB04110.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
ORB07273.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.959
ORB04071.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
ORB07559.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.775
ORB07560.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.775
ORB09079.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.744
ORB08472.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.737
ORB07045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.706
ORB05983.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.660
ORB05645.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.660
ORB03012.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.660
Your Current Organism:
Mycobacterium mantenii
NCBI taxonomy Id: 560555
Other names: CIP 109863, DSM 45255, JCM 18113, M. mantenii, Mycobacterium mantenii van Ingen et al. 2009, Mycobacterium sp. E152, Mycobacterium sp. E2660, Mycobacterium sp. E3078, Mycobacterium sp. E3121, Mycobacterium sp. NLA000401474, Mycobacterium sp. NLA000800224, strain NLA000401474
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