STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA96810.11,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (377 aa)    
Predicted Functional Partners:
ORB05227.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.657
ORA98805.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.576
ORB06984.1
FAD-linked oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.566
ORB04806.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.566
ORB01847.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.544
ORA96972.1
DUF4126 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
ORA99114.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.468
ORA97529.1
1,3-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.452
ORA99452.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
ORB09249.1
1,3-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.446
Your Current Organism:
Mycobacterium mantenii
NCBI taxonomy Id: 560555
Other names: CIP 109863, DSM 45255, JCM 18113, M. mantenii, Mycobacterium mantenii van Ingen et al. 2009, Mycobacterium sp. E152, Mycobacterium sp. E2660, Mycobacterium sp. E3078, Mycobacterium sp. E3121, Mycobacterium sp. NLA000401474, Mycobacterium sp. NLA000800224, strain NLA000401474
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