STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SME93708.1Predicted metal-dependent hydrolase, TIM-barrel fold. (282 aa)    
Predicted Functional Partners:
SMF79857.1
Uronate dehydrogenase.
 
  
  0.688
SMF75527.1
Phthalate 4,5-dioxygenase, reductase subunit.
  
  
 0.665
SMF73675.1
Ferredoxin-NADP reductase.
  
  
 0.662
SME93695.1
Transcriptional regulator, GntR family.
 
     0.629
SMF03439.1
Ferredoxin-NADP reductase.
     
 0.610
SMF14257.1
Hypothetical protein.
     
 0.610
SMF56608.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.610
SMF72589.1
Hypothetical protein.
     
 0.610
SMF40769.1
4,5-DOPA dioxygenase extradiol.
 
  
 0.595
SME92888.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
     
 0.578
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.