STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SME98072.1Methyltransferase domain-containing protein. (258 aa)    
Predicted Functional Partners:
SME90659.1
Amino acid adenylation domain-containing protein.
    
 0.911
SME90667.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
 0.911
SMF03952.1
Amino acid adenylation domain-containing protein.
    
 0.911
SMF69237.1
Amino acid adenylation domain-containing protein.
   
 0.839
SMF69245.1
Amino acid adenylation domain-containing protein.
   
 0.832
SMF03967.1
Amino acid adenylation domain-containing protein.
    
 0.778
SME98081.1
Transcriptional regulator, XRE family.
 
     0.774
SMF58648.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.758
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.634
SMF13349.1
Hypothetical protein; Belongs to the cytochrome P450 family.
    
 0.510
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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