STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SME99422.1Cupin domain-containing protein. (126 aa)    
Predicted Functional Partners:
SME99419.1
L-amino acid N-acyltransferase YncA.
    
  0.734
SMF12748.1
Succinylglutamate desuccinylase.
  
     0.586
SMF47902.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
 
  
  0.582
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.543
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.542
SMF15863.1
Transcriptional regulator, XRE family with cupin sensor.
  
 0.532
SMF79155.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
 
  
  0.523
SMF38947.1
TRAP transporter, DctM subunit.
   
    0.507
cbiD
cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
   
    0.499
SMF41468.1
TRAP transporter, DctM subunit.
   
    0.499
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
Server load: low (24%) [HD]