STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF03060.1Phage tail protein domain-containing protein. (715 aa)    
Predicted Functional Partners:
SMF03012.1
Hypothetical protein.
 
 
 0.996
SMF02966.1
Hypothetical protein.
 
 
 0.990
SMF02984.1
Phage protein D.
 
  
 0.988
SMF02937.1
Hypothetical protein.
 
 
 0.987
SMF03026.1
Putative baseplate assembly protein.
 
    0.959
SMF03074.1
Collagen triple helix repeat-containing protein.
 
     0.950
SMF02997.1
Phage baseplate assembly protein V.
 
     0.943
SMF02980.1
LysM domain-containing protein.
 
     0.937
SMF02973.1
Conserved hypothetical phage tail region protein.
 
     0.927
SMF03120.1
ATPase family associated with various cellular activities (AAA).
 
    0.917
Your Current Organism:
Tistlia consotensis
NCBI taxonomy Id: 560819
Other names: T. consotensis USBA 355, Tistlia consotensis USBA 355, alpha proteobacterium USBA 355
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.