Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SME93254.1 | SMF02229.1 | SAMN05428998_101568 | SAMN05428998_10334 | Glutamate synthase (NADPH) large subunit. | Hypothetical protein. | 0.422 |
SME93254.1 | hisE | SAMN05428998_101568 | SAMN05428998_104165 | Glutamate synthase (NADPH) large subunit. | phosphoribosyl-ATP pyrophosphatase. | 0.602 |
SMF02216.1 | SMF02229.1 | SAMN05428998_10333 | SAMN05428998_10334 | Chromate reductase. | Hypothetical protein. | 0.519 |
SMF02229.1 | SME93254.1 | SAMN05428998_10334 | SAMN05428998_101568 | Hypothetical protein. | Glutamate synthase (NADPH) large subunit. | 0.422 |
SMF02229.1 | SMF02216.1 | SAMN05428998_10334 | SAMN05428998_10333 | Hypothetical protein. | Chromate reductase. | 0.519 |
SMF02229.1 | SMF02236.1 | SAMN05428998_10334 | SAMN05428998_10335 | Hypothetical protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.547 |
SMF02229.1 | SMF82162.1 | SAMN05428998_10334 | SAMN05428998_14541 | Hypothetical protein. | Phage integrase family protein; Belongs to the 'phage' integrase family. | 0.530 |
SMF02229.1 | hisE | SAMN05428998_10334 | SAMN05428998_104165 | Hypothetical protein. | phosphoribosyl-ATP pyrophosphatase. | 0.440 |
SMF02229.1 | tatA | SAMN05428998_10334 | SAMN05428998_105242 | Hypothetical protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.412 |
SMF02236.1 | SMF02229.1 | SAMN05428998_10335 | SAMN05428998_10334 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.547 |
SMF82162.1 | SMF02229.1 | SAMN05428998_14541 | SAMN05428998_10334 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.530 |
hisE | SME93254.1 | SAMN05428998_104165 | SAMN05428998_101568 | phosphoribosyl-ATP pyrophosphatase. | Glutamate synthase (NADPH) large subunit. | 0.602 |
hisE | SMF02229.1 | SAMN05428998_104165 | SAMN05428998_10334 | phosphoribosyl-ATP pyrophosphatase. | Hypothetical protein. | 0.440 |
hisE | tatA | SAMN05428998_104165 | SAMN05428998_105242 | phosphoribosyl-ATP pyrophosphatase. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.741 |
tatA | SMF02229.1 | SAMN05428998_105242 | SAMN05428998_10334 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein. | 0.412 |
tatA | hisE | SAMN05428998_105242 | SAMN05428998_104165 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | phosphoribosyl-ATP pyrophosphatase. | 0.741 |